FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27163198
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCCG12704.6661528E-46.003130470
TAGCCGC12150.00179238965.826671670
CGCGCGG15500.00101081355.27002970
GTTCGGG18758.261682E-55.22786970
AGGCGCG18102.7308887E-45.114742870
Produced by FastQC (version 0.11.5)