FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22663477
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGCGCG11750.0079665855.556097570
ACGCGGG11800.0083480085.532554670
CCCGGCG26254.1463863E-85.388532670
Produced by FastQC (version 0.11.5)