FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7045972
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGAAAT4500.0022040377.70680331
CGCCACG9207.182495E-57.58661270
GGGTCGC9900.00136273346.507863570
TGCCGTT6300.007825346.092021558
CTACCGG8600.0062708595.241153226
TCCCCCG17502.0393277E-45.215587670
CCCGCGG16806.4273324E-45.113321370
Produced by FastQC (version 0.11.5)