FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7045972
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAACA6400.0094569475.981424349
TTCGGCG11751.7420916E-65.898601525
CGCCACG8609.171735E-45.693732762
TGCACCG8550.00968661255.45811169
CGTCTGA10200.00126444365.18210867
Produced by FastQC (version 0.11.5)