FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560881

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560881
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7826400
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATTG2300.00847240710.55139733
CGCGATC5502.769771E-58.1891743
GCGCGAT10952.1167009E-55.6953892
GCGATCT11907.9465724E-55.2406484
Produced by FastQC (version 0.11.5)