FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30694295
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCCG9750.0061867646.231755370
CGTCCGG10950.003077376.05326170
GTCGGCG11050.00340629585.998480370
CGCTCCG13659.779197E-45.665231770
CGCGGCG17109.4156094E-55.491299670
ACGCGGG13400.00483472275.358717470
Produced by FastQC (version 0.11.5)