FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6384173
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGTAC2750.002743380610.09087824
TTACGTT4850.0044395417.174181550
ACCCGCA6258.9968415E-46.750773467
TTCGGCG6904.4918316E-46.535459525
ATTCGGC8155.132191E-45.958570524
CGAAAAA7150.00466881555.8308871
GGATTCG10654.921532E-45.21112922
TCGGCGC10400.00201464825.003185326
Produced by FastQC (version 0.11.5)