FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005562520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005562520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45652778
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA345150.07.878029394-95
AGATCGG387800.07.789315794-95
TAGATCG144100.07.16878194-95
ATCGGAA337450.07.121821494-95
TCGGAAG350550.06.022430494-95
CGGAAGA372950.05.310594-95
AAGATCG167750.05.039732594-95
ACACGTC166950.05.00698494-95
Produced by FastQC (version 0.11.5)