FastQCFastQC Report
Fri 17 May 2024
EGAF00005564526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005564526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294896627
Total Bases44.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5741740.19470348163731285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)