FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005568194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005568194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5934248
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT333000.5611494497702152No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA331310.5583015741842943No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61800.10414124923663454No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)