FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005568195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005568195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5886211
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT284320.48302719695233487No Hit
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA282140.47932362601340656No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGAGCTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAG98950.1681047451408045TruSeq Adapter, Index 7 (97% over 37bp)
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG77920.13237717778040917No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)