FastQCFastQC Report
Sun 7 Aug 2022
EGAF00005568406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005568406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4401793
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG141660.3218234024180601No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG92810.21084589847818833No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGGACTAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAG60170.13669429707394237TruSeq Adapter, Index 20 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58050.13187807786508815No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)