EGAF00005577258 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577258
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57052
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	116	0.20332328402159436	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	97	0.17002033232840216	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	96	0.16826754539718153	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	80	0.14022295449765126	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	79	0.13847016756643063	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	71	0.12444787211666551	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	70	0.12269508518544486	No Hit
GCGGTAGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGA	70	0.12269508518544486	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	62	0.10867278973567973	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT	62	0.10867278973567973	No Hit
GCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGTA	60	0.10516721587323845	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	59	0.1034144289420178	No Hit
GCTCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCT	59	0.1034144289420178	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	58	0.10166164201079718	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTAGCC	20	4.363734E-4	105.35955	7
CAATGCA	45	1.3394378E-5	99.91398	145
TCGATTC	25	0.0010593425	84.28764	3
GTTCGAT	25	0.0010593425	84.28764	1
TTCGATT	25	0.0010593425	84.28764	2
GTGCTAC	30	0.0021842385	70.2397	1
TCACATC	45	1.3851887E-4	62.435295	4
AGTTGGT	35	0.0040237075	60.205456	8
CCATATG	60	8.112827E-6	58.53308	8
TAGGCCA	65	1.3035056E-5	54.03054	4
GTACCAT	40	0.00682549	52.679775	6
TGCTACT	40	0.00682549	52.679775	2
TAGTTCA	65	0.0072298	51.878414	145
GAGGGAA	55	3.7336897E-4	51.08342	6
ACGCAGG	70	0.009690166	48.17281	145
TCGCTCA	60	5.7348364E-4	46.826466	9
AGGCCAT	80	4.449168E-5	43.899815	5
GGACTGT	65	8.5069094E-4	43.22443	6
GTCCGTG	75	0.0017194647	37.461174	7
CTCCTCG	75	0.0017194647	37.461174	9