EGAF00005577259 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577259
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57052
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	116	0.20332328402159436	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	95	0.16651475846596087	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	75	0.13145901984154806	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	71	0.12444787211666551	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	67	0.11743672439178295	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	66	0.1156839374605623	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	65	0.11393115052934165	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	60	0.10516721587323845	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	59	0.1034144289420178	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	59	0.1034144289420178	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	58	0.10166164201079718	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGAGTT	10	0.0019225657	224.00279	145
CAACAAG	10	0.0073812907	142.94652	65-69
AAGCGAG	10	0.0077616298	140.56618	9
CGGTATA	20	4.3530314E-4	105.42463	2
ACGCAGG	40	0.001070478	84.001045	145
GGGAAAA	50	0.0025949979	67.200836	145
GCGGTAT	35	0.00401388	60.242645	1
CCCCAGG	35	0.00401388	60.242645	1
GGTTAGA	60	0.0053429618	56.0007	145
TTTAGAG	40	0.0068088444	52.712315	3
ATTAGAG	40	0.0068088444	52.712315	3
CCCAGGG	40	0.0068088444	52.712315	2
GAGGCAC	40	0.0068088444	52.712315	7
TTAGAGG	85	1.0872209E-6	49.611588	4
ACCAATT	70	0.009828571	48.0006	145
CTGTGAC	60	5.717407E-4	46.855392	9
TCAAAAA	100	7.09558E-4	44.80056	145
TATAGGG	100	3.3291926E-6	42.169853	2
AGTACTG	85	0.0031677522	33.074394	5
TACATCA	110	2.888969E-4	31.946857	4