EGAF00005577260 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577260
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57027
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	91	0.15957353534290775	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	85	0.14905220334227648	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	80	0.14028442667508373	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	77	0.1350237606747681	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	74	0.12976309467445246	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	67	0.11748820734038264	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	64	0.11222754134006699	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	63	0.11047398600662844	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	61	0.10696687533975134	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	61	0.10696687533975134	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	61	0.10696687533975134	No Hit
GGGTAGGGAAGCGAGGTTGACCTGTTAGGGTGAGAAGAATTATTCGAGTG	59	0.10345976467287425	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTGAGTAGGAGAGTGATAT	58	0.10170620933943571	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATTGA	15	0.007029575	145.23491	145
GACGATG	25	1.8450501E-4	130.71141	145
AGCTATG	35	3.7337006E-5	81.353386	7
TAGCTGA	60	6.5268454E-5	72.617455	145
GAGCTAT	40	7.237213E-5	71.18421	6
CCTTACG	30	0.0020715238	71.184204	1
AGTGCGG	30	0.0020715238	71.184204	8
ACGAGTG	30	0.0020715238	71.184204	5
GTGCGGC	30	0.0020715238	71.184204	9
CCCATAG	30	0.0020715238	71.184204	1
TCTAGCA	65	1.5603291E-7	65.7085	3
GCCCTGT	35	0.0038163562	61.015038	8
AACCACG	40	0.006474244	53.388157	7
CCGTGCG	40	0.006474244	53.388157	9
GGATCCT	40	0.006474244	53.388157	7
TAGTTCG	40	0.006474244	53.388157	9
TAGGATC	40	0.006474244	53.388157	5
AGGATCC	40	0.006474244	53.388157	6
TTCTGCC	40	0.006474244	53.388157	7
ATTCTGC	40	0.006474244	53.388157	6