EGAF00005577262 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577262
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62291
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	100	0.16053683517683132	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	89	0.14287778330737988	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	88	0.14127241495561157	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	82	0.1316402048450017	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	79	0.12682409978969675	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	78	0.12521873143792844	No Hit
GGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGT	78	0.12521873143792844	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	76	0.12200799473439182	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	73	0.11719188967908686	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	73	0.11719188967908686	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	72	0.11558652132731856	No Hit
TCCTAACCCTACTCCTAATCACATAACCTATTCCCCCGAGCAATCTCAAT	70	0.11237578462378194	No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA	68	0.10916504792024531	No Hit
AGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACTAGTCTCAA	68	0.10916504792024531	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	66	0.10595431121670866	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	65	0.10434894286494036	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	64	0.10274357451317204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATCTGC	10	0.0076097758	141.50845	6
GTATCCG	40	9.435718E-6	107.25305	145
TCACCGG	30	4.0570137E-4	107.253044	145
TCCATAC	20	4.240686E-4	106.13133	2
ATGCTGT	25	0.0010295118	84.90507	6
TATGCTG	25	0.0010295118	84.90507	5
GGTATGC	30	0.0021228152	70.75422	3
CCTGGGG	45	1.3370045E-4	62.892643	3
CCCTGGG	45	1.3370045E-4	62.892643	2
GTATACC	35	0.0039107096	60.646477	1
ACCCTGG	50	2.2510083E-4	56.60338	1
TAGCTGA	60	0.006348465	53.626522	145
ATTAGAG	40	0.0066340743	53.065666	3
CCGGTCG	40	0.0066340743	53.065666	9
ACATAGA	40	0.0066340743	53.065666	1
ACCCATT	40	0.0066340743	53.065666	7
CCATTAC	40	0.0066340743	53.065666	9
GAGGCAC	40	0.0066340743	53.065666	7
ATCCCTT	65	8.212333E-4	43.54106	6
CAAATCC	65	8.212333E-4	43.54106	3