EGAF00005577264 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577264
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39599
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	65	0.16414555923129373	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	61	0.1540442940478295	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	60	0.15151897775196344	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	60	0.15151897775196344	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	51	0.12879113108916893	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	51	0.12879113108916893	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	50	0.12626581479330284	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	46	0.11616454960983863	No Hit
GTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGGGCAGGCGGTGCCTC	45	0.11363923331397258	No Hit
GCTCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCT	44	0.11111391701810651	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	44	0.11111391701810651	No Hit
GTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCC	41	0.10353796813050835	No Hit
GTATTATACCATAGCCGCCTAGTTTTAAGAGTACTGCGGCAAGTACTATT	41	0.10353796813050835	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTGAGTAGGAGAGTGATAT	40	0.1010126518346423	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	40	0.1010126518346423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTTGTG	10	0.007674759	141.04178	2
CCTCGTG	20	4.285043E-4	105.781334	8
GCTGAAC	20	4.285043E-4	105.781334	1
CTCGTGG	25	0.0010402722	84.62506	9
CTGTGAC	45	1.4276775E-6	78.35654	9
TGAACCC	35	0.0039515183	60.446472	3
TATAGGG	95	5.5842975E-10	59.38601	2
GTATAGG	110	3.092282E-11	57.69891	1
CTAGTCA	50	2.2777972E-4	56.416706	8
TCAAAAA	80	2.2895217E-4	56.274242	145
CCCACCT	40	0.006703245	52.890667	9
GGTTAGT	60	5.6018407E-4	47.013924	8
GTTAGTC	60	5.6018407E-4	47.013924	9
TAGGGGT	70	0.0011966741	40.29765	4
TGAATGG	70	0.0011966741	40.29765	4
GCTGTGA	90	8.655146E-5	39.17827	8
GGGTTAG	75	0.0016797637	37.61114	7
ATAGGGG	75	0.0016797637	37.61114	3
ACAACCG	75	0.0016797637	37.61114	8
AGGGGTT	80	0.0023059424	35.260445	5