EGAF00005577267 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577267
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69790
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	112	0.160481444332999	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	94	0.13468978363662415	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGCTTTTTGGAAAGTCATGTCA	87	0.12465969336581172	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	82	0.11749534317237427	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	80	0.11462960309499928	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	80	0.11462960309499928	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	80	0.11462960309499928	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	78	0.1117638630176243	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	76	0.10889812294024932	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	74	0.10603238286287435	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	72	0.10316664278549935	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	71	0.10173377274681186	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	70	0.10030090270812438	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTGATC	20	4.176842E-4	106.55061	8
TACTGAT	20	4.176842E-4	106.55061	7
CTAGCCG	25	0.0010140332	85.240486	9
TCAGAGT	45	0.0019586505	72.1736	145
GTACTGA	40	7.3248855E-5	71.03374	6
AGCGCTA	50	0.002974347	64.95624	145
CGCAAAG	35	0.004113058	61.863083	145
TCTAGCC	35	0.0038520673	60.886066	3
GACCTCA	35	0.0038520673	60.886066	7
ATCGATA	35	0.0038520673	60.886066	9
AATCGAT	35	0.0038520673	60.886066	8
TAATCGA	35	0.0038520673	60.886066	7
ATATACA	60	7.607454E-6	59.194782	1
CTCTAGC	60	7.607454E-6	59.194782	2
AAAGCAG	40	0.006534726	53.275307	6
CCTTCTG	40	0.006534726	53.275307	9
ACTACGC	70	1.8954413E-5	50.738388	8
CCAATAG	45	0.008719512	49.524525	130-134
TATACAA	75	2.8502658E-5	47.355827	2
TACAACT	75	2.8502658E-5	47.355827	4