EGAF00005577285 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577285
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	83754
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	134	0.15999235857391886	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	120	0.14327673902141988	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	118	0.14088879337106286	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	118	0.14088879337106286	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	116	0.13850084772070587	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	110	0.1313370107696349	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	107	0.1277550922940994	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	107	0.1277550922940994	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	103	0.12297920099338538	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	96	0.1146213912171359	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	93	0.11103947274160039	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	91	0.10865152709124341	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	89	0.1062635814408864	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTTGT	25	0.0010217496	85.093124	1
CTTGTGG	30	0.0021068258	70.910934	3
CTAGATA	30	0.0021068258	70.910934	4
CCTAGAT	30	0.0021068258	70.910934	3
TTAGAGT	60	9.2597475E-8	70.910934	4
CCTTGTG	30	0.0021068258	70.910934	2
ATTAGAG	35	0.0038812854	60.780804	3
GAGGCAC	35	0.0038812854	60.780804	7
GAGCTTT	55	0.004586856	58.244335	145
CTAAGTG	55	0.004586856	58.244335	145
GTGACGG	80	3.001441E-4	53.39064	145
CAAGCCA	60	0.0064721885	53.390636	145
TCTTGTT	40	0.0065842103	53.1832	2
GTTAGAG	80	6.7687506E-7	53.1832	3
GTTGTAC	40	0.0065842103	53.1832	8
ATTGGGA	40	0.0065842103	53.1832	2
TGGGACA	40	0.0065842103	53.1832	4
TTCCCTT	65	0.008881404	49.28367	145
AAGTTGG	75	2.884583E-5	47.273956	5
GTATAGC	60	5.486933E-4	47.273956	6