EGAF00005577293 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577293
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	52807
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	100	0.18936883367735338	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	70	0.13255818357414736	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	70	0.13255818357414736	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	67	0.12687711856382677	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	61	0.11551498854318556	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	60	0.11362130020641202	No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC	60	0.11362130020641202	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	60	0.11362130020641202	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	55	0.10415285852254436	No Hit
GTATAGTACGGATGCTACTTGTCCAATGATGGTAAAAGGGTAGCTTACTG	54	0.10225917018577083	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	54	0.10225917018577083	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	54	0.10225917018577083	No Hit
GCGGTAGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGA	53	0.1003654818489973	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	53	0.1003654818489973	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCTCA	25	0.0010327955	84.818954	7
GAGGGAA	40	7.490091E-5	70.682465	6
GCGAGTA	45	1.3418542E-4	62.828854	9
TATACTC	35	0.003923164	60.58497	5
CTCACGG	40	0.0066551836	53.011852	2
GGTACCG	40	0.0066551836	53.011852	6
AGGGTAC	40	0.0066551836	53.011852	4
ACCCTTC	40	0.0066551836	53.011852	6
ACGGGAG	40	0.0066551836	53.011852	5
TACCGCG	40	0.0066551836	53.011852	8
TGCGAGT	55	3.6171658E-4	51.40543	8
AGTGGTG	65	0.0077384096	50.988033	145
GGAAGGT	60	5.556073E-4	47.121647	9
CTGATGC	60	5.556073E-4	47.121647	4
GTGTAGA	90	1.5481655E-6	47.12164	1
TATGAGT	100	3.1973377E-6	42.409477	4
GTTGGGA	75	0.0016660613	37.697315	9
CCTGATG	75	0.0016660613	37.697315	3
AGGGAAG	75	0.0016660613	37.697315	7
CCCTATA	140	7.8717494E-7	35.341232	2