EGAF00005577305 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577305
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	128236
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	199	0.15518263202220905	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	159	0.12399014317352382	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	156	0.12165070650987243	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	152	0.1185314576250039	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	142	0.11073333541283259	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	134	0.10449483764309554	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	130	0.10137558875822701	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGTG	25	0.001007049	85.430504	9
TGACACT	25	0.001007049	85.430504	4
GACACTG	30	0.0020765504	71.19208	5
CACTGAG	30	0.0020765504	71.19208	7
CTGACAC	30	0.0020765504	71.19208	3
GGCGTGA	95	1.390381E-7	66.871346	145
CCGTGCG	65	1.5747901E-7	65.715775	9
CTGGAAT	35	0.003825577	61.021782	4
TTAGAGT	50	2.1922389E-4	56.95367	4
ATTGTGG	50	2.1922389E-4	56.95367	8
GTTATAG	50	2.1922389E-4	56.95367	2
GTTAGAG	65	1.21214325E-5	54.76314	3
GACAGGC	40	0.00648982	53.394062	2
ACAGGCC	40	0.00648982	53.394062	3
GGTGCTC	40	0.00648982	53.394062	8
ATGGTCT	40	0.00648982	53.394062	4
AGCCTTA	55	3.5100948E-4	51.776062	6
CTCTAGC	110	1.9463187E-9	51.776062	2
ATTAGAG	70	1.8795688E-5	50.851486	3
CACATCC	70	1.8795688E-5	50.851486	9