EGAF00005577311 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577311
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	158763
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	289	0.1820323375093693	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	262	0.1650258561503625	No Hit
GCCTAGGACTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT	234	0.14738950511139245	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	233	0.14675963543142923	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	224	0.1410908083117603	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	195	0.12282458759282705	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	187	0.11778563015312131	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	180	0.11337654239337881	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	168	0.10581810623382021	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	168	0.10581810623382021	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	167	0.10518823655385699	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	164	0.10329862751396737	No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC	161	0.10140901847407773	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCTGGT	10	0.0074558184	142.54855	7
TATGCGA	85	5.3409167E-8	76.79851	145
TCAGAGT	80	3.353447E-6	67.99868	145
AGTGGTG	155	1.2732926E-11	63.172962	145
ATTAGAG	70	2.6124872E-7	61.09224	3
CACATCC	60	7.5004737E-6	59.39523	9
TCACCGG	75	1.9974826E-4	58.02554	145
GTTATAG	50	2.1813595E-4	57.01942	2
GAGGCAC	75	4.2086322E-7	57.01942	7
TTTATGA	60	0.006025194	54.39894	145
CCGTGCG	80	6.571827E-7	53.455708	9
TGCTATC	40	0.0064630834	53.455708	2
AACCACG	70	1.8688086E-5	50.910202	7
GGAGTGC	60	5.365039E-4	47.516182	3
GTCTATT	65	7.9589145E-4	43.86109	2
ATGGTCT	65	7.9589145E-4	43.86109	4
GCAGCTA	105	0.0010499947	41.44681	145
GCTATAC	70	0.0011461673	40.72816	3
TTACCGT	70	0.0011461673	40.72816	6
CTCCAGT	110	0.0013199236	39.562862	145