EGAF00005577320 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577320
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	133859
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	227	0.16958142523102668	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	168	0.12550519576569374	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	167	0.1247581410289932	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	160	0.11952875787208928	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	154	0.11504642945188592	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	154	0.11504642945188592	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	154	0.11504642945188592	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	147	0.10981704629498203	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	145	0.10832293682158092	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	140	0.10458766313807813	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	139	0.10384060840137757	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	139	0.10384060840137757	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	134	0.10010533471787478	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATCA	55	3.7984988E-5	81.11872	145
GGGACTG	60	8.870302E-8	71.399475	5
TATGCGA	80	2.888606E-6	69.7114	145
CAATGCA	50	0.0026506013	66.92294	145
GACTGTC	65	1.5439218E-7	65.90721	7
CTGTCTA	70	2.57789E-7	61.19955	9
ACTGTCT	70	2.57789E-7	61.19955	8
CCCTGGG	50	2.1612932E-4	57.119583	2
TTGTCCG	60	0.0054571605	55.76912	145
CTAGATA	40	0.006416189	53.549606	4
CCGGGGG	40	0.006416189	53.549606	9
ACCGGGG	40	0.006416189	53.549606	8
CCTAGAT	40	0.006416189	53.549606	3
GCTACAG	40	0.006416189	53.549606	3
CACCAGC	40	0.006416189	53.549606	7
TCTAGCA	110	1.897206E-9	51.926895	3
CTCTAGC	180	0.0	51.566284	2
TCACCGG	65	0.0074896966	51.47919	145
CTGCACG	70	1.8479363E-5	50.999626	9
TACCTGC	70	1.8479363E-5	50.999626	6