EGAF00005577321 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577321
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	133859
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	196	0.1464227283933094	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	193	0.1441815641832077	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	164	0.12251697681889151	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	156	0.11654053892528705	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	145	0.10832293682158092	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	142	0.10608177261147923	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	140	0.10458766313807813	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGGTC	30	0.0020492217	71.431984	3
ATGGTCT	30	0.0020492217	71.431984	4
TCACCGG	65	1.011498E-4	66.571594	145
CTGACAC	45	1.2807781E-4	63.495094	3
AGCCTTA	50	2.156437E-4	57.145588	6
CTAACTT	65	1.1885149E-5	54.947685	9
CCTAACG	60	0.006159706	54.089417	145
CACTGAG	40	0.0064046467	53.57399	7
CCGTGCG	55	3.4528368E-4	51.950535	9
GTAAAGC	70	1.8429664E-5	51.022846	3
CCCAGGG	90	1.4565139E-6	47.621323	2
CCCCAGG	110	1.1095108E-7	45.45672	1
AATCCAG	80	4.0576924E-5	44.644993	5
GTAGACT	80	4.0576924E-5	44.644993	4
ATCCAGG	80	4.0576924E-5	44.644993	6
GTCCTGA	85	5.8030746E-5	42.018818	6
GTAATCC	85	5.8030746E-5	42.018818	3
TGTCCTG	85	5.8030746E-5	42.018818	5
CTTGTAC	70	0.0011331382	40.818275	3
TTGTACT	70	0.0011331382	40.818275	4