EGAF00005577323 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577323
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61305
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	131	0.21368567001060274	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	80	0.13049506565532992	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	79	0.12886387733463828	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	72	0.11744555908979692	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	71	0.11581437076910528	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	70	0.11418318244841366	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	68	0.11092080580703043	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	67	0.1092896174863388	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	66	0.10765842916564718	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	64	0.10439605252426393	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	64	0.10439605252426393	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	64	0.10439605252426393	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	62	0.10113367588288066	No Hit
GCCTAGGACTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT	62	0.10113367588288066	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATCA	15	0.006995429	145.48409	145
CAGAGAT	15	0.006995429	145.48409	145
GCTTATT	60	6.4771084E-5	72.74204	145
AGAGATT	30	0.0021120987	70.84339	4
GTGTCAC	35	0.0032875384	63.358543	115-119
AACATGT	35	0.0033209645	63.19719	110-114
CAGGTAA	45	1.3285551E-4	62.9719	9
TTAGAGT	35	0.0038909959	60.722908	4
TTGACAG	35	0.0038909959	60.722908	9
GACTGTG	60	7.718394E-6	59.03616	7
ACTGGGC	40	0.0055220667	55.58063	120-124
CTCTCAA	40	0.0066006808	53.13254	1
TAGAGCT	55	3.5813844E-4	51.52247	4
CTGTGCC	55	3.5813844E-4	51.52247	9
AGAGCTG	70	1.9230338E-5	50.602425	5
TGAATTA	65	0.008137732	50.359875	145
GCTGTGC	60	5.501165E-4	47.228928	8
TACTCAG	65	8.160684E-4	43.595932	5
TGAGTGC	70	0.0011751994	40.481937	6
TCAGGTA	70	0.0011751994	40.481937	8