FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length40-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATA14.0No Hit
GGGTATAATTGTCTGGGTCGCCTAGGAGGTCTGGTGAGAATAGTGTTAAT14.0No Hit
CATAAAACCCTCATTCACACGAGAAAACACCCTCATGTTCATACAC14.0No Hit
GGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCATACCCCCCA14.0No Hit
GGGCACTTGCGCTTACTTTGTAGCCTTCATCAGGGTTTGCTGAAGATGGCGGTATAT14.0No Hit
GTACAATATTCATGGTGGCTGGCAGTAATGTACGAAATACATAGCGGTTGTTGATGGGTGAATCAATAC14.0No Hit
CTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGC14.0No Hit
ATTATGAGAATGACTGCGCTGGTGAAGCTTCAGGGGGTTT14.0No Hit
ACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAG14.0No Hit
GTACCATAAATACTTGACTACATGTAGTACATAAAAAATCAACCCAAATC14.0No Hit
AGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAAT14.0No Hit
ATGAAGGCTGTTGCTATAGTTGCAAGCAGGAGGATAATGCCGATGTTTCA14.0No Hit
GTTGAGGGATAGGAGGAGAATGGGGGATAGGTGTATGAACATGAGGGTGT14.0No Hit
CTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGC14.0No Hit
CCAATAGGATCCTCCCGAATCAACCCTGACCCCTCTCCTTCATAAATTAT14.0No Hit
CCACCATCCTCCGTGAAATCAATATCCCGCACAAGAGTGCTACTCTCCTC14.0No Hit
GTCTTAGGCCCCAAAAATTTTGGTGCAACTCCAAATAAAAGTAATAACCA14.0No Hit
TTCGAAGCCAAAGTGATGTTTGGATGTAAAGTGAAATATTAGTTGGCGGA14.0No Hit
GATTTTATCGGAATGGGAGGTGATTCATAGGGGGTTGTTTGATCCCGTTT14.0No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAGGAGGGTGACGGGCGGTGTGTACG14.0No Hit
ATACTAAACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAAA14.0No Hit
TCATAGTAATACCCATCATAATCGGAGGCTTTGGCAACTGACTAGTTCCC14.0No Hit
CGGTGTACTCGTAGGTTCAGTACCATTGGTGGCCAATTGATTTGATGGTA14.0No Hit
ATTTTTAGTTGGGTGATGAGGAATAGTGTAAGGAGTATGGGGGTAATTAT14.0No Hit
GTTTAAGTGCTGTGGCCAGAAGCGGGGGGAGGGGGGGGTTTGGTGGAAAT14.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)