FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length40-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGCCCACCAT14.0No Hit
CGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCT14.0No Hit
GGCAGGTGCCAAGGAGTGAGCAGAAGTTTCATCATGCGGAGAAGTTGGAT14.0No Hit
GCACTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCA14.0No Hit
GTGTATGAACATGAGGGTGTTTTCTCGTGTGAATGAGGGTTTTATG14.0No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT14.0No Hit
CTACAAGGACAGGCCCATTTGAGTATTTTGTTTTCAATTAGGGAGATAGTTGGT14.0No Hit
GTATTGATTCACCCATCAACAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTAC14.0No Hit
ATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTACCC14.0No Hit
GGGTTAGCGATGGAGGTAGGATTGGTGCTGTGGGTGAAAGAGTATGATGG14.0No Hit
GTAGGAGAATGCTGTTTAGTTATAGGAACATGAGGGGGAATTTTCGGTTG14.0No Hit
GTTTACTGCTAAATCCACCTTCGACCCTTAAGTTTCATAAGGGCTATCGT14.0No Hit
ATGATGGACCATGTAACGAACAATGCTACAGGGATGAATATTATGGAGAA14.0No Hit
ACCCTCCTATCACTCAACCTCGTAGCCTTTAGACTTGCCTTCTTCTGCCT14.0No Hit
GAGCAGGAGAGAGTGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG14.0No Hit
AAACCCCCTGAAGCTACACCGGCGCAGTCATTCTCATAAT14.0No Hit
CATCACGATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCT14.0No Hit
ATTCTTTACCTTTCACTTCATCTTGCCCTTCATTATTGCAGCCCTAGCAG14.0No Hit
GGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTG14.0No Hit
CGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATAT14.0No Hit
ACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCACCCC14.0No Hit
GGGTACAGATGTGCAGGAATGCTAGGTGTGGTTGGTTGATGCCGATTGTA14.0No Hit
CTCCTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTA14.0No Hit
CAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCTTG14.0No Hit
GTGAAGTACGGGCGGCTGGTGATTTTATCGGAATGGGCGGTGATTCCTAA14.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)