EGAF00005577332 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577332
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	119409
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	209	0.1750286829300974	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	161	0.13483070790308938	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	159	0.13315579227696406	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	144	0.12059392508102405	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	142	0.11891900945489871	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	136	0.11389426257652271	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	128	0.10719460007202136	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	127	0.10635714225895872	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	126	0.10551968444589604	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	126	0.10551968444589604	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	120	0.10049493756752004	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	75	2.3000302E-6	72.426796	145
TATATCG	50	2.6403814E-6	70.80281	5
TTTGGCG	50	0.002941119	65.18411	145
ACTGATC	35	0.003908897	60.68812	3
GGGACTG	35	0.003908897	60.68812	5
ACCTAGG	35	0.003908897	60.68812	1
TACTGAT	35	0.003908897	60.68812	2
ACTGTCT	35	0.003908897	60.68812	8
GACTGTC	35	0.003908897	60.68812	7
CCACGAC	70	2.7293572E-7	60.68812	9
AGAATCG	55	0.004290332	59.258286	145
GGATTGA	60	0.0060541485	54.3201	145
TCAGCCG	80	2.7631124E-4	54.320095	145
CTGTCTA	40	0.0066309683	53.102104	9
CCCCTTG	40	0.0066309683	53.102104	9
CGGATGC	40	0.0066309683	53.102104	9
GTACGGA	40	0.0066309683	53.102104	6
TATGGTC	60	5.53792E-4	47.20187	3
ATGGTCT	60	5.53792E-4	47.20187	4
AGTACGG	75	2.9182567E-5	47.20187	5