EGAF00005577333 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577333
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	119409
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	193	0.16162935792109473	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	163	0.13650562352921472	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	148	0.12394375633327472	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	146	0.12226884070714937	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	145	0.12143138289408673	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	142	0.11891900945489871	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	141	0.11808155164183604	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	136	0.11389426257652271	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	129	0.10803205788508403	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	127	0.10635714225895872	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	125	0.10468222663283337	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	124	0.1038447688197707	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	121	0.10133239538058271	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	55	3.7683458E-7	98.16381	145
CCCTAGT	45	0.0019841925	71.9868	145
CTTGAAA	30	0.0021191777	70.825226	8
TATGGTC	75	5.7825673E-9	66.103546	3
ATGGTCT	75	5.7825673E-9	66.103546	4
ATAGCAT	35	0.0039039992	60.707336	3
CCAGACT	35	0.0039039992	60.707336	9
TTGCGAG	35	0.0039039992	60.707336	9
AGGCCAG	40	0.0066226693	53.118923	6
GCCAGAC	40	0.0066226693	53.118923	8
ATATACA	100	5.597758E-8	49.57766	1
TGGTCTG	100	5.597758E-8	49.57766	5
TCACTCG	105	0.0010880447	41.13531	145
GCATTGC	70	0.001181176	40.471558	6
GATAGCA	70	0.001181176	40.471558	2
GTAAGAG	110	6.134962E-6	38.631943	9
GAACATG	75	0.0016580104	37.773457	7
TATACAA	135	5.91157E-7	36.724194	2
CCCAAGC	80	0.0022760816	35.412617	8
CCATCCA	80	0.0022760816	35.412617	9