EGAF00005577334 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577334
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59348
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	117	0.19714227943654375	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	80	0.13479813978567096	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	76	0.12805823279638742	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	71	0.11963334905978297	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	67	0.11289344207049944	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	66	0.11120846532317855	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	64	0.10783851182853676	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	63	0.10615353508121587	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	63	0.10615353508121587	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	63	0.10615353508121587	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	62	0.10446855833389498	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	61	0.10278358158657411	No Hit
GCTCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCT	61	0.10278358158657411	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATAAGC	10	0.0075548226	141.84628	3
AAGCTCT	10	0.0075548226	141.84628	6
CGGACGA	10	0.0075548226	141.84628	2
TTCAGGT	40	0.0011968409	81.6858	145
ACAGGTT	45	0.0019101249	72.6096	145
AATCCAG	35	0.003873041	60.791264	5
ATGCTGT	35	0.003873041	60.791264	6
TATGCTG	35	0.003873041	60.791264	5
GTAATCC	35	0.003873041	60.791264	3
GTGCTCC	35	0.003873041	60.791264	9
ACTATCG	40	0.006570266	53.192356	8
AGGAGTG	40	0.006570266	53.192356	5
CCAGGTC	40	0.006570266	53.192356	8
GTGATAA	40	0.006570266	53.192356	1
ATACTAT	40	0.006570266	53.192356	6
ACCTAGG	40	0.006570266	53.192356	7
ATCCAGG	40	0.006570266	53.192356	6
ATTAGAC	95	1.15781186E-4	37.32797	3
TTAGACT	95	1.15781186E-4	37.32797	4
GAGGCCT	85	0.0030310245	33.375595	7