EGAF00005577340 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577340
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63558
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	110	0.17307026652821045	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	93	0.1463230435193052	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	92	0.14474967745995784	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	90	0.1416029453412631	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	87	0.136882847163221	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	85	0.13373611504452626	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	83	0.13058938292583153	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	81	0.1274426508071368	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	80	0.1258692847477894	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	79	0.12429591868844206	No Hit
GGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGT	76	0.11957582051039994	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	73	0.11485572233235786	No Hit
TCCTAACCCTACTCCTAATCACATAGCCTATTCCCCCGAGCAATCTCAAT	69	0.10856225809496839	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	67	0.10541552597627364	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	64	0.10069542779823154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCCCG	15	1.3357538E-4	141.87233	5
CCCGTAG	20	4.1979965E-4	106.40426	8
ATGCTCG	30	1.7694647E-5	94.58155	9
ATATGCT	30	1.7694647E-5	94.58155	7
TATGCTC	30	1.7694647E-5	94.58155	8
AATATGC	30	1.7694647E-5	94.58155	6
AGCCCGT	25	0.0010191625	85.123405	6
CAGCCGG	40	0.0010835755	83.76365	145
TATGGTC	30	0.0021015047	70.936165	3
ATGGTCT	30	0.0021015047	70.936165	4
TAGTAGC	30	0.0021015047	70.936165	2
TCACCGG	50	0.002626684	67.010925	145
GGATATG	55	0.003832069	60.919014	145
CTTGTAC	35	0.003871506	60.80243	3
TTGTACT	35	0.003871506	60.80243	4
ACCTACA	35	0.003871506	60.80243	2
CCCATAG	35	0.003871506	60.80243	1
GAGTATC	40	0.0065676607	53.20213	7
ATTGGGA	40	0.0065676607	53.20213	2
TGGGACA	40	0.0065676607	53.20213	4