EGAF00005577343 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577343
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106933
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	171	0.15991321668708441	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	146	0.13653409144043466	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	134	0.12531211132204276	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	133	0.12437694631217677	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	131	0.12250661629244479	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	126	0.11783079124311484	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	121	0.11315496619378489	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	120	0.11221980118391889	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	116	0.10847914114445494	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	35	7.013731E-4	93.52811	145
GGGTATC	25	9.989062E-4	85.595314	9
AACCACG	60	8.913412E-8	71.32943	7
GCGGGTA	40	7.1932314E-5	71.32943	9
CCCATAG	45	1.2887218E-4	63.403934	1
AGACTGT	35	0.0037947393	61.139507	5
GTGTATT	35	0.0037947393	61.139507	1
CGCATGA	115	4.2197098E-7	56.930157	145
TCACCGG	60	0.0059477915	54.558067	145
GCGCGTA	40	0.006437586	53.49707	9
AAGCGCG	40	0.006437586	53.49707	7
AGCGCGT	40	0.006437586	53.49707	8
CTGATGC	55	3.4742136E-4	51.875946	4
GCACTGG	45	0.00900484	49.141888	130-134
AGATGCG	60	5.336703E-4	47.552956	8
GCGAGTA	60	5.336703E-4	47.552956	9
GCTCTAG	65	7.91695E-4	43.89503	1
TAAGACT	65	7.91695E-4	43.89503	9
GGCGGGT	70	0.0011401344	40.75967	8
TGCGGCG	110	5.837537E-6	38.90696	5