EGAF00005577350 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577350
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63535
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	107	0.16841111198551978	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	86	0.135358463838829	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	76	0.11961910757850003	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	73	0.11489730070040134	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	73	0.11489730070040134	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	71	0.11174942944833556	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	71	0.11174942944833556	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	71	0.11174942944833556	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	69	0.10860155819626977	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT	69	0.10860155819626977	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	68	0.10702762257023687	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	67	0.10545368694420398	No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGACCCCCACCTCCAAA	67	0.10545368694420398	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	67	0.10545368694420398	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCATA	40	0.0066020894	53.131893	1
ACCTATG	40	0.0066020894	53.131893	7
GGATATA	65	0.008196324	50.271935	145
CTAGGGG	90	4.8517733E-4	48.410007	145
GTACTGA	60	5.503003E-4	47.228344	6
TGCCTGT	60	5.503003E-4	47.228344	1
CCGCAGT	65	8.163401E-4	43.595398	1
TTGTCTG	85	6.0574876E-5	41.67207	9
TATACAA	70	0.0011755904	40.481438	5
TATAGTG	110	6.0794864E-6	38.641373	5
TAAGCTC	75	0.0016501896	37.782677	5
CAGTACT	80	0.0022653723	35.42126	4
ATACCTA	80	0.0022653723	35.42126	5
CCTATAC	150	1.3321387E-6	33.05984	3
TTAACAC	90	0.004034855	31.485563	3
TACCTAT	115	3.5835613E-4	30.801094	6
ATTAGAG	95	0.0052565034	29.828428	3
CGCAGTA	95	0.0052565034	29.828428	2
GAGGCAC	95	0.0052565034	29.828428	7
GCAGTAC	100	0.006753715	28.337008	3