EGAF00005577351 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577351
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63535
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	93	0.14637601322105925	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	80	0.12591485008263162	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	75	0.11804517195246715	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	73	0.11489730070040134	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	73	0.11489730070040134	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	73	0.11489730070040134	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	72	0.11332336507436847	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	67	0.10545368694420398	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	66	0.10387975131817108	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	66	0.10387975131817108	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT	66	0.10387975131817108	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATTTAG	15	0.007005365	145.42142	145
AACTTAG	15	0.007005365	145.42142	145
AAGGAGC	10	0.0075794496	141.7	6
TATGCGA	40	8.682195E-6	109.066055	145
TGTATAT	45	1.26165105E-8	94.46666	3
GCTGTGT	85	4.6856294E-6	64.1565	145
TATAGCC	45	1.3283087E-4	62.977776	7
CCCAGGG	35	0.0038902033	60.72857	2
TTTGAAT	90	6.5768454E-6	60.59225	145
CTGCACA	50	2.2363839E-4	56.68	4
TGGGCCT	75	4.343783E-7	56.68	5
ACGCCGG	60	0.0059413943	54.53303	145
GTGGGCC	65	1.2400182E-5	54.5	4
TCTGCAC	40	0.0065993336	53.1375	3
AGGAGCC	40	0.0065993336	53.1375	7
CCGTGCG	40	0.0065993336	53.1375	9
AGGCCTG	40	0.0065993336	53.1375	8
GTACTGA	40	0.0065993336	53.1375	1
CCCCAGG	40	0.0065993336	53.1375	1
AAAGGAG	40	0.0065993336	53.1375	5