EGAF00005577355 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577355
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	173530
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	256	0.14752492364432662	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	233	0.13427073128565667	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	221	0.12735550048982885	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	193	0.11121996196623062	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	192	0.11064369273324497	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	188	0.10833861580130237	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	182	0.10488100040338846	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGCCGG	50	2.9948262E-5	85.127304	145
GTAGTCG	60	7.394148E-5	70.93942	145
TCAGAGA	65	1.09901615E-4	65.482544	145
AAGCGAG	55	4.3647997E-6	65.07615	9
CTGTCCA	50	2.1357062E-4	57.267014	9
CCTGGGG	75	4.08676E-7	57.267014	3
CCCTGGG	65	1.1751272E-5	55.064438	2
ACCTGTC	55	3.4196762E-4	52.06092	7
CCCTAGT	70	1.8222236E-5	51.131264	1
GGCTCCC	75	2.7402497E-5	47.72251	9
TACCCAG	60	5.253013E-4	47.722507	5
AACCACG	90	1.4378511E-6	47.722507	7
CACCAGC	60	5.253013E-4	47.722507	7
CGCATGA	160	9.183532E-8	46.553993	145
CATCCGG	95	7.159649E-4	44.803844	145
AGCGCTA	120	4.2235413E-5	44.33714	145
CCCAGCA	70	0.001122289	40.90501	7
TCTAGCA	105	4.1534568E-6	40.905006	3
ATTGTGG	90	8.037235E-5	39.768757	8
TATGCTG	90	8.037235E-5	39.768757	5