EGAF00005577356 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577356
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	140301
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	215	0.15324195836095253	No Hit
GTATAGGGGTTAGTCCTTGCTATGTTATGCTTGGTTATAATTTTTCATCT	210	0.149678191887442	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	195	0.13898689246691043	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	187	0.13328486610929358	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	168	0.11974255350995361	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	159	0.11332777385763466	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	156	0.11118951397352833	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	155	0.11047676067882624	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT	148	0.10548748761591151	No Hit
GCCATACACTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCA	144	0.10263647443710308	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	143	0.10192372114240099	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATAAGC	30	0.0020788575	71.1757	3
TATGGTC	40	7.278503E-5	71.1757	3
ATGGTCT	40	7.278503E-5	71.1757	4
AAGCTCT	30	0.0020788575	71.1757	6
CCGTGCG	75	5.5697456E-9	66.43065	9
AGCCTTA	55	4.510928E-6	64.70518	6
CAATGCA	90	5.725655E-6	62.12486	145
GTGACGG	75	1.7427516E-4	59.639866	145
TGGTCTG	65	1.2143915E-5	54.750534	5
TATCAGG	40	0.006497005	53.38177	2
GTATCAG	40	0.006497005	53.38177	1
ATACCAT	85	3.23446E-4	52.62341	145
GAAATCG	65	0.0074151447	51.611423	145
CTCCAGT	65	0.0074151447	51.611423	145
TCCGTGC	105	7.919152E-8	47.450462	8
GAAGAGT	65	8.010169E-4	43.800426	4
CTTTGCC	65	8.010169E-4	43.800426	4
CATGTAC	65	8.010169E-4	43.800426	3
TGCCGCC	65	8.010169E-4	43.800426	7
TGTAGTC	115	1.6193917E-7	43.324337	3