EGAF00005577361 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577361
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	167850
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	279	0.16621983914209115	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	251	0.1495382782246053	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	208	0.12392016681560918	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	186	0.11081322609472744	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	182	0.10843014596365803	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	182	0.10843014596365803	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	180	0.10723860589812334	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	169	0.10068513553768245	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	168	0.10008936550491511	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCTGG	10	0.007370883	143.09836	1
TACCCAG	25	9.877679E-4	85.85902	5
CAGCACA	30	0.0020368446	71.54918	9
CCCAGCA	30	0.0020368446	71.54918	7
CTACCCA	30	0.0020368446	71.54918	4
ATTGTGG	55	4.376716E-6	65.04471	8
CAATGCA	45	1.2713693E-4	63.599274	4
GCAGCTC	45	1.2713693E-4	63.599274	8
TGCAGCT	45	1.2713693E-4	63.599274	7
TTAGCGC	35	0.0037525257	61.32787	3
TAGCGCT	35	0.0037525257	61.32787	4
AGCGCTG	35	0.0037525257	61.32787	5
CTTAGCG	35	0.0037525257	61.32787	2
ATTAGAG	135	0.0	58.29933	3
GCTGCGA	55	0.004746447	57.782436	145
CAATCAG	55	0.004746447	57.782436	145
GAGGCAC	140	0.0	56.217213	7
ACGAGTG	90	2.2591848E-8	55.649364	5
GGAATCT	40	0.005565558	55.515144	135-139
CGCTGTG	40	0.0063660587	53.661884	7