FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2421
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGA60.24783147459727387No Hit
GGTCTGAGCTATGATATCAATTGGCTTCCTAGGGTTTATCGTGTGAGCAC40.16522098306484925No Hit
GAATATGATAGTGAAATGGATTTTGGCGTAGGTTTGGTTTAGGGTGTAGC40.16522098306484925No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN40.16522098306484925No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG40.16522098306484925No Hit
ATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCA40.16522098306484925No Hit
GTGATGAGTGTGCCTGCAAAGATGGTAGAGTAGATGACGGGTTGGGCCAG40.16522098306484925No Hit
CTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTG40.16522098306484925No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAA40.16522098306484925No Hit
CTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCTAG30.12391573729863693No Hit
GTATTTAGTTGGGGCATTTCACTGTAAAGAGGTGTTGGTTCTCTTAATCT30.12391573729863693No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA30.12391573729863693No Hit
TTCCAGTACACTTACCATGTTACGACTTGTCTCCTCTATATAAATGCGTA30.12391573729863693No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG30.12391573729863693No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC30.12391573729863693No Hit
TAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATT30.12391573729863693No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT30.12391573729863693No Hit
CTTTAGTAGGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAA30.12391573729863693No Hit
ATGATGGACCATGTAACGAACAATGCTACAGGGATGAATATTATGGAGAA30.12391573729863693No Hit
GTATTATACCCACACCCACCCAAGAACAGGGTTTGTTAAGATGGCAGAGC30.12391573729863693No Hit
CATAAGGAAAGGTTAAAAAAAGTAAAAGGAACTCGGCAAATCTTACCCCG30.12391573729863693No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC30.12391573729863693No Hit
ACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGC30.12391573729863693No Hit
CTTCAGGGCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCTAAAT30.12391573729863693No Hit
TATATGGTGTGCTCACACGATAAACCCTAGGAAGCCAATTGATATCATAG30.12391573729863693No Hit
GCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCAC30.12391573729863693No Hit
ATATAGGATTTAGCCTATAATTTAACTTTGACAAAGTTATGAAATGGTTT30.12391573729863693No Hit
ATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTGAAGTA30.12391573729863693No Hit
GTATAAACTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCC30.12391573729863693No Hit
CTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGAC30.12391573729863693No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG30.12391573729863693No Hit
AGTATGAGGAGCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGA30.12391573729863693No Hit
GTATAGTACGGATGCTACTTGTCCAATGATGGTAAAAGGGTAGCTTACTG30.12391573729863693No Hit
GCAGTAATGTTAGCGGTTAGGCGTACGGCCAGGGCTATTGGTTGAATGAG30.12391573729863693No Hit
GTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGCC30.12391573729863693No Hit
GTTATATGTTTGGGATTTTTTAGGTAGTGGGTGTTGAGCTTGAACGCTTT30.12391573729863693No Hit
AGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCT30.12391573729863693No Hit
GCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGAGGTCATTAGG30.12391573729863693No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG30.12391573729863693No Hit
CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCT30.12391573729863693No Hit
ACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCA30.12391573729863693No Hit
GCCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTT30.12391573729863693No Hit
ATGTACTGTTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTAAGGGG30.12391573729863693No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers