EGAF00005577368 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577368
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95830
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	180	0.1878326202650527	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	145	0.15130961076907024	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	138	0.14400500886987375	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	105	0.1095690284879474	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	103	0.10748199937389126	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	103	0.10748199937389126	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	100	0.10435145570280706	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	99	0.10330794114577899	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	98	0.10226442658875091	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	97	0.10122091203172284	No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAA	97	0.10122091203172284	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	96	0.10017739747469477	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAAGGA	45	1.2955711E-4	63.32939	3
CCGATGC	35	0.0038112735	61.067627	4
CCTCAGG	35	0.0038112735	61.067627	1
GATGCAT	35	0.0038112735	61.067627	6
CCTGGTG	35	0.0038112735	61.067627	3
CGATGCA	35	0.0038112735	61.067627	5
ATGCATA	35	0.0038112735	61.067627	7
TTAGGTG	55	0.004080651	59.998463	145
TCCTGTA	50	2.1813191E-4	56.996452	7
GGATTGA	60	0.0057585374	54.998592	145
CTATACA	40	0.0064656	53.434174	4
CAACCGT	40	0.0064656	53.434174	9
CAATTCG	40	0.0064656	53.434174	9
TCAGGAT	40	0.0064656	53.434174	3
AGCCTTA	40	0.0064656	53.434174	6
GCTTTAC	40	0.0064656	53.434174	1
GCTAAAC	55	3.4926398E-4	51.814953	3
CGGGAGT	65	0.007902952	50.76793	145
TCCTATA	80	4.1119652E-5	44.528477	2
AGACTTC	65	7.9588563E-4	43.843422	6