EGAF00005577369 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577369
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95830
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	194	0.20244182406344569	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	114	0.11896065950120004	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	111	0.11583011583011582	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	109	0.11374308671605968	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	109	0.11374308671605968	No Hit
ATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	101	0.10539497025983513	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	100	0.10435145570280706	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACCTA	40	7.2229755E-5	71.26253	1
TAGCCCG	45	1.294046E-4	63.344467	5
CCTCGTG	60	7.4851996E-6	59.385437	8
AGCCTTA	85	1.4762918E-8	58.686787	6
CCCGTAG	50	2.1787551E-4	57.010017	8
GCTGAAC	65	1.2027525E-5	54.81733	1
GACCGGA	60	0.0067894026	52.758503	145
GGGTAGT	55	3.4885385E-4	51.82729	6
CTCGTGG	70	1.8650273E-5	50.901802	9
GCCTTAC	115	2.8467184E-9	49.57393	7
CATACTT	75	2.8045648E-5	47.50835	5
CTAGCCT	160	2.3646862E-11	44.539078	4
ACTAACT	75	0.001607043	38.00668	8
AGGAGCC	80	0.0022062	35.631264	7
AGCCCGT	80	0.0022062	35.631264	6
TGAGTGC	80	0.0022062	35.631264	6
GCCCGTA	80	0.0022062	35.631264	7
GGTAGTC	80	0.0022062	35.631264	7
GGAATGG	85	0.0029700503	33.535305	3
GCCTACC	85	0.0029700503	33.535305	8