FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4975
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT250.5025125628140703No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG150.3015075376884422No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG140.2814070351758794No Hit
ATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCATCAA100.20100502512562815No Hit
GTATAGGATTGCTTGAATGGCTGCTGTGTTGGCATCTGCTCGGGCGTACC100.20100502512562815No Hit
GTACAAGGAAGGGGTAGGCTATGTGTTTTGTCAGGGGGTTGAGAATGAGT100.20100502512562815No Hit
GTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACA100.20100502512562815No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG100.20100502512562815No Hit
CTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGC100.20100502512562815No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA90.18090452261306533No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC90.18090452261306533No Hit
TCCTAATACTAACTACCTGACTCCTACCCCTCACAATCATGGCAAGCCAA90.18090452261306533No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT90.18090452261306533No Hit
GGTATATAGTTTAAACAAAACGAATGATTTCGACTCATTAAATTATGATA80.16080402010050251No Hit
CTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGC80.16080402010050251No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT80.16080402010050251No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA80.16080402010050251No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT80.16080402010050251No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN80.16080402010050251No Hit
GTACAATATTCATGGTGACTGGCAGTAATGTACGAAATACATAGCGGTTG80.16080402010050251No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA80.16080402010050251No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT70.1407035175879397No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC70.1407035175879397No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG70.1407035175879397No Hit
ATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAG70.1407035175879397No Hit
GTCTAGGCCATATGTGTTGGAGATTGAGACTAGTAGGGCTAGGCCTACCG70.1407035175879397No Hit
CTTCAGGGCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCTAAAT70.1407035175879397No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT70.1407035175879397No Hit
CTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCA70.1407035175879397No Hit
TTCCAGTACACTTACCATGTTACGACTTGTCTCCTCTATATAAATGCGTA70.1407035175879397No Hit
CATATAACCTCCCCCAAAATTCAGAATAATAACACACCCGACCACACCGC70.1407035175879397No Hit
CTACTATAGCCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTACC70.1407035175879397No Hit
CTATTAACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGA70.1407035175879397No Hit
ATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCCACAGA70.1407035175879397No Hit
CTATAGGCGCTTGTCAGGGAGGTAGCGATGAGAGTGATAGATAGGGCTCA60.1206030150753769No Hit
GATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATGCCAGTATC60.1206030150753769No Hit
ATCTGAGGGGGGTCATCCATGGGGACAAGAAGGGATTTGACTGTAATGTG60.1206030150753769No Hit
GCTATTACCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCT60.1206030150753769No Hit
GTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTACGACA60.1206030150753769No Hit
GGGTAGGGAAGCGAGGTTGACCTGTTAGGGTGAGAAGAATTATTCGAGTG60.1206030150753769No Hit
GTTAGGGTGAGAAGAATTATTCGAGTGCTATAGGCGCTTGTCAGGGAGGT60.1206030150753769No Hit
GCTAAATAGGTTGTTGTTGATTTGGTTAAAAAATAGTAGGGGGATGATGC60.1206030150753769No Hit
ATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAA60.1206030150753769No Hit
GTTTAGCTCAGAGCGGTCAAGTTAAGTTGAAATCTCCTAAGTGTAAGTTG60.1206030150753769No Hit
TCTCTATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCC60.1206030150753769No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA60.1206030150753769No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC60.1206030150753769No Hit
GTACATAGTACATAAAGCCATTTACCGTACATAGCACATTACAGTCAAAT60.1206030150753769No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT60.1206030150753769No Hit
GGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTT60.1206030150753769No Hit
TCATTATTCTCGCACGGACTACAACCACGACCAATGATATGAAAAACCAT60.1206030150753769No Hit
GTCCCAATGTATGGGATGGCGGATAGTAAGTTTGTAATTACTGTGGCCCC60.1206030150753769No Hit
CTCTAAATCACCACGATCAAAAGGGACAAGCATCAAGCACGCAACAATGC60.1206030150753769No Hit
GTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCC60.1206030150753769No Hit
CATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAAC60.1206030150753769No Hit
CTCCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGC50.10050251256281408No Hit
GTTTTGAGTAGTCCTCCTATTTTTCGAATATCTTGTTCATTGTTAAGGTT50.10050251256281408No Hit
ATATACACCAACAAACAATGTTCAACCAGTAACTACTACTAATCAACGCC50.10050251256281408No Hit
CTACTAATCTCATCAATACAACCCCCGCCCATCCTACCCAGCACACACAC50.10050251256281408No Hit
CTATCAAACTCCTGAGCCAACAACTTAATATGACTAGCTTACACAATAGC50.10050251256281408No Hit
GTACTATTTATACTAAAAGAGTAAGACCCTCATCAATAGATGGAGACATA50.10050251256281408No Hit
ATACTTGGGTGGTACCCAAATCTGCTTCCCCATGAAAGAACAGAGAATAG50.10050251256281408No Hit
GGCTAAGGTTGTCTGGTAGTAAGGTGGAGTGGGTTTGGGGCTAGGTTTAG50.10050251256281408No Hit
TCCCCACCCCATCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTT50.10050251256281408No Hit
GATAAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCA50.10050251256281408No Hit
ACTAAGCACTCTACTCTCAGTTTACTGCTAAATCCACCTTCGACCCTTAA50.10050251256281408No Hit
GAATAGTAATGAGGATGTAAGTCCGTGGGCGATTATGAGGATGACTGCGC50.10050251256281408No Hit
GTAATAACCATGCACACTACTATAGCCACCCTAACCCTGACTTCCCTAAT50.10050251256281408No Hit
TCCTAGACCTAACCTGACTAGAAAAGCTATTACCTAAAACAATTTCACAG50.10050251256281408No Hit
CGTTAACCCTAACAAAAAAAACTCATATCCCCATTATGTAAAATCCATTG50.10050251256281408No Hit
GCTAGGAATAGTCCTGTGGTGATTTGGAGGATCAGGCAGGCGCCAAGGAG50.10050251256281408No Hit
CTATTAAAGTTTACCACAACCACCACCCCATCATACTCTTTCACCCACAG50.10050251256281408No Hit
GCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAA50.10050251256281408No Hit
CTCTTCAATCAGCCACATAGCCCTCGTAGTAACAGCCATTCTCATCCAAA50.10050251256281408No Hit
ACCCTAGGCTCACTAAACATTCTACTACTCACTCTCACTGCCCAAGAACT50.10050251256281408No Hit
CTGTAGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATAT50.10050251256281408No Hit
CAACAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACA50.10050251256281408No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG50.10050251256281408No Hit
GCCTAGGGTGTTGTGAGTGTAAATTAGTGCGATGAGTAGGGGAAGGGAGC50.10050251256281408No Hit
TTACTATTCTGCCTAGCAAACTCAAACTACGAACGCACTCACAGTCGCAT50.10050251256281408No Hit
CCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCG50.10050251256281408No Hit
ACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTT50.10050251256281408No Hit
GTATCAGGCGGCGGCTTCGAAGCCAAAGTGATGTTTGGATGTAAAGTGAA50.10050251256281408No Hit
CTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTG50.10050251256281408No Hit
CCCAAGTATTGACTCACCCATCAACAACCGCTATGTATTTCGTACATTAC50.10050251256281408No Hit
CTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCACTC50.10050251256281408No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC50.10050251256281408No Hit
ACCATGAGCCCTACAAACAACTAACCTGCCACTAATAGTTATGTCATCCC50.10050251256281408No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers