FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2571
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG70.2722676001555815No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA60.2333722287047841No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG50.19447685725398678No Hit
GGGTGGAAGGTGATTTTATCGGAATGGGAGGTGATTCCTAGGGGGTTGTT40.15558148580318942No Hit
GTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTGTGG40.15558148580318942No Hit
GTTATGTCCTACAAGCATTAATTAATTAACACACTTCAGTAAGTATGCTC40.15558148580318942No Hit
ACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATTTG40.15558148580318942No Hit
ATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAA40.15558148580318942No Hit
GTTACGACTTGTCTCCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGT30.11668611435239205No Hit
GAATACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCT30.11668611435239205No Hit
TAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCA30.11668611435239205No Hit
AACTAATACTAACATCTCAGACGCTCAGGAAATAGAAACCGTCTGAACTA30.11668611435239205No Hit
GATTAGTAGTAGTTACTGGTTGAACATTGTTTGTTGGTGTATATATTGTA30.11668611435239205No Hit
CTATAGTTGTAGCAGGAGTCTTCTTACTCATCCGCTTCCACCCCCTAGCA30.11668611435239205No Hit
GTAAAGAATCGTGTGAGGGTGGGACTGTCTACTGAGTAGCCTCCTCAGAT30.11668611435239205No Hit
GCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAA30.11668611435239205No Hit
CTCTACTCTCAGTTTACTGCTAAATCCACCTTCGACCCTTAAGTTTCATA30.11668611435239205No Hit
GTTTTGAGTAGTCCTCCTATTTTTCGAATATCTTGTTCATTGTTAAGGTT30.11668611435239205No Hit
GTTTATTACTCTTTTTTGAATGTTGTCAAAACTAGTTAATTGGAAGTTAA30.11668611435239205No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA30.11668611435239205No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG30.11668611435239205No Hit
TCTCTATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCC30.11668611435239205No Hit
GTATAATTGTCTGGGTCGCCTAGGAGGTCTGGTGAGAATAGTGTTAATGT30.11668611435239205No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT30.11668611435239205No Hit
ATAAATAATGGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGG30.11668611435239205No Hit
CCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTTTG30.11668611435239205No Hit
CCCCGAAAATGTTGGTTATACCCTTCCCGTACTAATTAATCCCCTGGCCC30.11668611435239205No Hit
CCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAA30.11668611435239205No Hit
GACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAA30.11668611435239205No Hit
ATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGA30.11668611435239205No Hit
TAGCTATTGTGTATTCAGATATGTTAAAGCCACTTTCGTAGTTTATTTTG30.11668611435239205No Hit
CTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACA30.11668611435239205No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT30.11668611435239205No Hit
ACATAGCACATTACAGTCAAATCCCTTCTCGTCCCCATGGATGACCCCCC30.11668611435239205No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG30.11668611435239205No Hit
GTGTAAGTTGGGTGCTTTGTGTTAAGCTACACTCTGGTTCGTCCAAGTGC30.11668611435239205No Hit
ATATTGCTAGGGTGGCGCTTCCAATTAGATGCATGAGTAGGTGGCCTGCA30.11668611435239205No Hit
ATATATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTCC30.11668611435239205No Hit
ATCTAGGCCTTCTTACGAGCCAAAACCTGCCCCTACTCCTCCTAGACCTA30.11668611435239205No Hit
CTAGTATATCGCTCACACCTCATATCCTCCCTACTATGCCTAGAAGGAAT30.11668611435239205No Hit
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT30.11668611435239205No Hit
CCTATGAAGGCTGTTGCTATAGTTGCAAGCAGGAGGATAATGCCGATGTT30.11668611435239205No Hit
GATAGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAA30.11668611435239205No Hit
GGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCG30.11668611435239205No Hit
TCTGAATACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT30.11668611435239205No Hit
CTTCAGGGGGTTTGGATGAGAATGGCTGTTACTACGAGGGCCATGTGGCT30.11668611435239205No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT30.11668611435239205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)