EGAF00005577374 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577374
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	142517
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	225	0.15787590252390943	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	203	0.1424391476104605	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	195	0.13682578218738817	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATATGTTTTTTGGAAAGTCATGTCA	192	0.13472077015373604	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	189	0.13261575812008392	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	159	0.11156563778356265	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	159	0.11156563778356265	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	154	0.10805728439414244	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	152	0.10665394303837436	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	144	0.10104057761530204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTGCG	70	3.2086973E-9	71.22805	9
CCAAACG	30	0.002072867	71.22805	9
CGCATGA	110	2.5683403E-7	61.19997	145
GTCTGTA	35	0.003818799	61.052616	7
CTCTTGG	40	0.0064783334	53.421043	1
CAATACC	40	0.0064783334	53.421043	4
TCACCGG	110	1.8430526E-5	50.999977	145
TGTAGTC	100	5.3631084E-8	49.85964	3
ACTGATC	65	7.981621E-4	43.83265	3
TACTGAT	65	7.981621E-4	43.83265	2
CCTGGGG	65	7.981621E-4	43.83265	3
CCCTGGG	65	7.981621E-4	43.83265	2
TCCGTGC	115	1.6102786E-7	43.35621	8
TGTGTAT	135	6.17921E-5	41.55554	145
AACCACG	105	4.2926713E-6	40.701748	7
CTATAAC	70	0.0011494344	40.701744	2
TATATCG	70	0.0011494344	40.701744	5
CTCGCCC	70	0.0011494344	40.701744	9
GGCCTCG	70	0.0011494344	40.701744	6
ATCTTAT	90	8.269185E-5	39.57114	7