FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142517
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC2540.17822435218254665No Hit
GTGGGTGGTTGTGTTGATTCAAATTATATGTTTTTTGGAAAGTCATGTCA1890.13261575812008392No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA1730.12138902727393926No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT1700.11928401524028713No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG1640.11507399117298288No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC1590.11156563778356265No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT1550.10875895507202649No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA1500.10525060168260628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)