FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9912
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG200.20177562550443903No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC170.1715092816787732No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA160.16142050040355124No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG160.16142050040355124No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG130.1311541565778854No Hit
GTACTATACTTCACAACAATCCTAATCCTAATACCAACTATCTCCCTAAT130.1311541565778854No Hit
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG130.1311541565778854No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA120.12106537530266344No Hit
CCCTTAACAGTACATAGCACATAAAGCCATTTACCGTACATAGCACATTA120.12106537530266344No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT120.12106537530266344No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC120.12106537530266344No Hit
TAGTGGAAGTGAGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAG110.11097659402744149No Hit
CATTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTG110.11097659402744149No Hit
CCCTATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATA110.11097659402744149No Hit
GTTGTATGTAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT110.11097659402744149No Hit
CTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTG110.11097659402744149No Hit
CTTTAGTAGGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAA100.10088781275221952No Hit
GTATTAGGATTAGGATTGTTGTGAAGTATAGTACGGATGCTACTTGTCCA100.10088781275221952No Hit
GTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAAAATGTTTAGACGG100.10088781275221952No Hit
TACTAGAAGTGTGAAAACGTAGGCTTGGATTAAGGCGACAGCGATTTCTA100.10088781275221952No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT100.10088781275221952No Hit
TAACAGTACATAGCACATAAAGCCATTTACCGTACATAGCACATTACAGT100.10088781275221952No Hit
GTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGCC100.10088781275221952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)