EGAF00005577380 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577380
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59011
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	102	0.1728491298232533	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	87	0.14743014014336311	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	76	0.12878954771144363	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	74	0.12540034908745828	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	68	0.11523275321550219	No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAA	67	0.11353815390350952	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	61	0.10337055803155343	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	61	0.10337055803155343	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	60	0.10167595871956076	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGTCAT	30	1.7755981E-5	94.50439	9
CCGTGCG	25	0.0010221095	85.05395	9
TGTAGAA	25	0.0010221095	85.05395	2
GACCCAG	45	0.0017634616	74.08289	145
TCCGTGC	30	0.0021075744	70.87829	8
GCTTTAG	40	7.395368E-5	70.87829	1
TAAGACT	35	0.0038826754	60.75282	9
GGCACAT	60	0.0055139544	55.562164	145
ATCTCGC	40	0.006586589	53.158714	6
TACATGC	40	0.006586589	53.158714	2
CTCTAGC	55	3.5715627E-4	51.547844	2
ATAAAAG	65	0.007567623	51.288155	145
CTTTAGG	60	5.4861E-4	47.252193	2
TTAGGGA	125	3.1781929E-7	39.69184	4
TTACACA	80	0.002258457	35.439144	4
TTGTGTT	105	2.0932178E-4	33.751564	9
GGGAGTC	85	0.0030403323	33.35449	7
TATTAGA	85	0.0030403323	33.35449	2
GGTTGTG	85	0.0030403323	33.35449	7
GGGCAGT	30	0.0035291866	32.38973	105-109