EGAF00005577381 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577381
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59011
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	97	0.1643761332632899	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	78	0.13217874633542898	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	77	0.1304841470234363	No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA	72	0.1220111504634729	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	66	0.11184355459151685	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	63	0.10675975665553879	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	63	0.10675975665553879	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	60	0.10167595871956076	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTGAGC	10	0.0075786645	141.69635	9
TACCCGC	30	0.0021111295	70.848175	5
GAACTCC	30	0.0021111295	70.848175	6
CTACCCG	30	0.0021111295	70.848175	4
TAACTGA	30	0.0021111295	70.848175	1
TCTAGCA	55	4.6028363E-6	64.40743	3
GCTGTGT	70	1.279506E-4	63.388355	145
GCCTACC	35	0.0038892152	60.727013	2
CAGTACA	60	7.711638E-6	59.04015	9
GCATGTA	60	7.711638E-6	59.04015	2
CCCATAT	60	0.0055524115	55.46481	145
TTTGAAT	80	2.476089E-4	55.464806	145
AGCATGT	65	1.239109E-5	54.498596	1
TAGCATC	60	5.497604E-4	47.232117	5
CATGTAC	80	4.2300155E-5	44.28011	3
CTCTAGC	65	8.155411E-4	43.598877	2
GTACTGC	100	3.152607E-6	42.508907	6
ACTGCTC	85	6.0493265E-5	41.6754	8
GTATAAA	85	6.0493265E-5	41.6754	1
ATGTACT	90	8.473061E-5	39.360096	4