EGAF00005577384 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577384
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121455
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	216	0.1778436457947388	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	169	0.13914618583014285	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	149	0.12267918158988926	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	146	0.12020913095385122	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	145	0.11938578074183855	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	144	0.11856243052982586	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	141	0.11609237989378782	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	139	0.11444567946976246	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	139	0.11444567946976246	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	138	0.11362232925774979	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	136	0.11197562883372442	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	130	0.10703552756164834	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	130	0.10703552756164834	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	129	0.10621217734963567	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	128	0.10538882713762299	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	126	0.10374212671359763	No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGACCCCCACCTCCAAA	123	0.10127207607755959	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	123	0.10127207607755959	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCATGCT	20	4.1310725E-4	106.89479	8
ATTGTGG	30	1.7359242E-5	95.017586	8
GGATAAA	25	0.0010029325	85.51583	1
TCAGAGA	55	4.1100655E-5	79.83123	145
CCACGAC	55	4.9145456E-8	77.74166	9
ACTGATC	50	2.5409208E-6	71.26319	8
TACTGAT	50	2.5409208E-6	71.26319	7
CTGTCTA	30	0.0020680747	71.26318	9
ACGGGTG	30	0.0020680747	71.26318	7
GGGACTG	30	0.0020680747	71.26318	5
ACTGTCT	30	0.0020680747	71.26318	8
GACTGTC	30	0.0020680747	71.26318	7
TGAGCGT	70	1.35707E-4	62.724537	145
ATCACCG	35	0.0038099855	61.082737	5
CTACATC	35	0.0038099855	61.082737	1
CGCATGA	110	2.9834882E-7	59.87342	145
ACACACG	55	0.00411862	59.87342	145
ACCACGA	75	4.2048305E-7	57.01055	8
AACCACG	80	6.565915E-7	53.447395	7
CATAGAC	40	0.0064634094	53.447395	2