EGAF00005577385 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577385
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121455
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	202	0.16631674282656128	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	162	0.1333827343460541	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	153	0.12597258243794	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	148	0.12185583137787658	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	143	0.11773908031781317	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	136	0.11197562883372442	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	133	0.10950557819768639	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	128	0.10538882713762299	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	126	0.10374212671359763	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	125	0.10291877650158494	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	124	0.10209542628957227	No Hit
GTCTAGGCCATATGTGTTGGAGATTGAGACTAGTAGGGCTAGGCCCACCG	123	0.10127207607755959	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	122	0.10044872586554691	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	45	1.9023622E-5	93.245415	145
CCACGAC	40	7.231952E-5	71.2601	9
TCCGACA	30	0.0020684307	71.26009	4
CATCTGG	30	0.0020684307	71.26009	9
ATCCGAC	30	0.0020684307	71.26009	3
GTATCCG	30	0.0020684307	71.26009	1
GACATCT	30	0.0020684307	71.26009	7
TATCCGA	30	0.0020684307	71.26009	2
TCCGAAG	60	7.921978E-5	69.93406	145
GTACCTA	45	1.2956496E-4	63.342308	1
CTTCCCG	35	0.0038106404	61.080082	9
AGCCTTA	60	7.498713E-6	59.383415	6
CTAAGTG	110	4.083995E-7	57.218777	145
TGATACG	40	0.0064645186	53.445076	6
GATACGC	40	0.0064645186	53.445076	7
ATGATAC	40	0.0064645186	53.445076	5
CCAGAAG	40	0.0064645186	53.445076	3
GAGACCA	40	0.0064645186	53.445076	5
CAGAGAC	40	0.0064645186	53.445076	3
AGCAGAG	40	0.0064645186	53.445076	1