EGAF00005577389 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577389
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	105205
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	159	0.15113350125944583	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	159	0.15113350125944583	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	155	0.14733140059883085	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	139	0.1321229979563709	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	126	0.11976617080937217	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	125	0.11881564564421843	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	123	0.11691459531391095	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	117	0.11121144432298845	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	113	0.10740934366237347	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	110	0.10455776816691222	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	110	0.10455776816691222	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	108	0.10265671783660474	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	108	0.10265671783660474	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	107	0.10170619267145097	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATATCC	10	0.0074948636	142.27708	1
TGGTCCC	10	0.0074948636	142.27708	5
TATGCGA	35	4.5515517E-6	124.3152	145
GGTATAC	20	4.1583864E-4	106.70782	3
GCTTAAC	30	0.002081713	71.13854	1
ATACCAT	50	0.002925179	65.26548	145
CGAATCA	70	1.418142E-4	62.1576	145
AAGAGCG	35	0.003835079	60.9759	5
AGCCCGT	35	0.003835079	60.9759	6
CATAGAC	35	0.003835079	60.9759	2
CGATTCA	55	0.004267105	59.332256	145
AATCCTT	65	1.21604535E-5	54.72196	5
AACCGTG	40	0.006505926	53.35391	8
GGGTATC	40	0.006505926	53.35391	9
TAACCGT	40	0.006505926	53.35391	7
CTACAGC	40	0.006505926	53.35391	8
ACCGTGC	40	0.006505926	53.35391	9
TACAGCG	40	0.006505926	53.35391	9
GTCATAA	65	0.008263364	50.204216	145
ACGCAGG	115	2.8720515E-5	47.293823	145